2019-04 MIA文章精選

傳統(tǒng)濾波方法不保邊的原因是:都使用全窗口回歸,會(huì)有沿著圖像邊緣的擴(kuò)散。本文提出把窗口的邊緣直接放在待處理像素的位置,這就切斷了可能的法線方向的擴(kuò)散。具體到一個(gè)像素位置,直接枚舉八個(gè)可能的方向,讓數(shù)據(jù)自適應(yīng)地選擇一個(gè)最佳的方向。

  • 201903 Radiology 人工智能自動(dòng)勾畫鼻咽癌GTV,港中文Pheng-Ann Heng團(tuán)隊(duì) [paper] [deepcare解讀]

Deep Learning for Automated Contouring of Primary Tumor Volumes by MRI for Nasopharyngeal Carcinoma, 818訓(xùn)練,203測(cè)試;用20個(gè)測(cè)試數(shù)據(jù)比較AI和醫(yī)生的分割結(jié)果。AI assistance improved contouring accuracy (five of eight oncologists had a higher median DSC after AI assistance; average median DSC, 0.74 vs 0.78; P < .001), reduced intra- and interobserver variation (by 36.4% and 54.5%, respectively), and reduced contouring time (by 39.4%). AI自動(dòng)勾畫然后醫(yī)生修改,平均精度由74%提高至79%。

  • 201904-騰訊深度解構(gòu)產(chǎn)業(yè)互聯(lián)網(wǎng):九大領(lǐng)域打法,五個(gè)維度框架,[機(jī)器之心], [騰訊研究院介紹]

  • 201904-前深度學(xué)習(xí)時(shí)代CTR預(yù)估模型的演化之路 [知乎王喆]

  • MED NeurIPS 2018: Is your ML Methods solving a real clinical problem? by Tal Arbel

Focus lesion detection, segmentation, disease prediction in patient images
ML in Medical Imaging: patient diagnosis, understanding disease development, predicting patient outcome from images, personalized medicine.

ML方法沒有被廣泛應(yīng)用到臨床workflow的原因/挑戰(zhàn)

  • CV中的DL方法在醫(yī)學(xué)圖像中不總是work。比如BraTS分割任務(wù)DL很成功,但是存活時(shí)間預(yù)測(cè)任務(wù)效果不如人意。**Errors in performance lead to clinician mistrust.
  • Clinicians don't trust black box methods. Interpretability is very important.
  • No large scale annotated medical dataset for training. 導(dǎo)致通常在small, proprietary or benchmark dataset開發(fā)算法,缺乏魯棒性。

Examine machine learning performance and metrics in real clinical contexts

  • 臨床影響:將病灶檢測(cè)和分割算法加入商業(yè)軟件中,提升了efficiency and precision,節(jié)省~5倍的時(shí)間和金錢;提升treatment analysis for almost all (22/23) new MS drugs in circulation wordwide. Clinical impact formula: Synergy with clinicians, end-users when designing method + trying methods and metrics for success to real clinical objectives = Clinical impact

201811-MICCAI 18 分割Decathlon冠軍:3D Semi-Supervised Learning with Uncertainty-Aware Multi-View Co-Training,Nvidia. [arxiv]

Exploiting multi-viewpoint consistency for co-training.

LiTS測(cè)試集:95.9, 72.6


實(shí)驗(yàn)結(jié)果
  • Why could a multiclass dice loss function solve the class imbalance problem?

In cross entropy, each pixel has the same weight irrespective of the class. by using a Dice loss, the weight of a pixel is different. If the CE tumor is small for example, then false positives or false negatives will impact the dice loss more and will thus intrinsically be weighted more.

  1. Novel image reconstruction techniques that quickly produce images humans can read from source data.
  2. A focus on automated image labeling and annotation, which includes “information extraction from the imaging report, electronic phenotyping and prospective structure image reporting.”
  3. Machine learning models for clinical data, including pre-trained and distributed learning techniques.
  4. Algorithms capable of explaining their findings to users.
  5. Methods for deidentifying images and sharing image datasets that are adequately validated.
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