DiscoVista是一個(gè)可視化多物種樹(shù)的軟件,由python2編寫;大家在安裝的時(shí)候可以單獨(dú)構(gòu)建一個(gè)python2的環(huán)境。
下載安裝包
git clone https://github.com/esayyari/DiscoVista
安裝r-base
mamba install r-base
# 配置程輯包
find . -name *R*
cd /public/home/Wanggs/mambaforge-pypy3/bin
R
install.packages(c("Reshape","Reshape2","ggplot2","plyr","scales","ape","optparse"))
配置python2
wget https://bootstrap.pypa.io/pip/2.7/get-pip.py
python2 get-pip.py
pip2 install dendropy
由于DiscoVista是由python腳本直接運(yùn)行的,所以我們可以進(jìn)入其文件夾
cd /public/home/Wanggs/software/DiscoVista/src/utils
python2 discoVista.py -h
成功!
軟件網(wǎng)址:esayyari/DiscoVista (github.com)